BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H01LP1|AL426741
(794 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1115 1174 0.0
3x_Contig666 351 1e-96
>3x_Contig1115
Length = 4702
Score = 1174 bits (592), Expect = 0.0
Identities = 602/604 (99%), Gaps = 1/604 (0%)
Strand = Plus / Minus
Query: 9 acaacaggtgcaac-tcaagcccctacacaattccaagccccaccacaggttcaacagca 67
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 acaacaggtgcaacctcaagcccctacacaattccaagccccaccacaggttcaacagca 567
Query: 68 aggtgcacctaatgtggaaggattggccattcaatctttagacagacaacaacagatggc 127
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aggtgcacctaatgtggaaggattggccattcaatctttagacagacaacaacagatggc 507
Query: 128 tatgccgcctcaacctggattctatggtatgcaacctccgcagaaccctggctacggctt 187
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tatgccgcctcaacctggattctatggtatgcaacctccgcagaaccctggctacggctt 447
Query: 188 tattccacaagggttccctcaaggtcaataccagcaattccctgggcaaaatattccccc 247
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tattccacaagggttccctcaaggtcaataccagcaattccctgggcaaaatattccccc 387
Query: 248 tgttatccctaatcaattcggtaatgccggatttcctaatcaacctgttaaccctcagga 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tgttatccctaatcaattcggtaatgccggatttcctaatcaacctgttaaccctcagga 327
Query: 308 acaattccaacaagtaccaccgataatgtacaatcaaacacaaggaaacattgcacatca 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 acaattccaacaagtaccaccgataatgtacaatcaaacacaaggaaacattgcacatca 267
Query: 368 tatgcaacatccgcagatggctatgccaccaatgcaaaatcaacctcctgttcagcccca 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tatgcaacatccgcagatggctatgccaccaatgcaaaatcaacctcctgttcagcccca 207
Query: 428 gcagccccaccaacagcagttacctccccaatacttgcctcaacaacaccaacaagatca 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gcagccccaccaacagcagttacctccccaatacttgcctcaacaacaccaacaagatca 147
Query: 488 gcagcaccaacaacaacaccaacagcaacaagtgttccaacagcctcactccgttgacac 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 gcagcaccaacaacaacaccaacagcaacaagtgttccaacagcctcactccgttgacac 87
Query: 548 tgctgctagaacccaagctgtccgttctactcaagattatgagcattctaactctccaac 607
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 86 tgctgctagaacccaagctgtccgttctactcaagattattagcattctaactctccaac 27
Query: 608 acct 611
||||
Sbjct: 26 acct 23
>3x_Contig666
Length = 2037
Score = 351 bits (177), Expect = 1e-96
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 618 acagaatcagagcaggtgccaactccacctcatacacctagagagtatcgccgtggtcca 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 acagaatcagagcaggtgccaactccacctcatacacctagagagtatcgccgtggtcca 64
Query: 678 aggaggtttggcacccaagatcctttgactgatgaagaattgagacgtcttcaaatcaga 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 aggaggtttggcacccaagatcctttgactgatgaagaattgagacgtcttcaaatcaga 124
Query: 738 caatcgaaggttgacaaaattctcagacactctggtgtaatgactccaagagacaag 794
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 caatcgaaggttgacaaaattctcagacactctggtgtaatgactccaagagacaag 181
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5242
Number of Sequences: 1807
Number of extensions: 5242
Number of successful extensions: 286
Number of sequences better than 1.0e-20: 2
length of query: 794
length of database: 10,358,551
effective HSP length: 16
effective length of query: 778
effective length of database: 10,329,639
effective search space: 8036459142
effective search space used: 8036459142
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)